Having your compliance department knowingly ignore violations, especially when there are external factors that you can't control, is not a characteristic any of the leadership at UND is going to tolerate. Just my opinion from interactions I've had with people in those positions though. Again, I think this is a non-issue if the transcripts never get in front of the compliance department. But they did and here we are.
However, based on today's ruling on Texas Tech's QB, you could probably just sue the NCAA and get everything waived, but that speaks more to what kind of mess things have turned into than anything.